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Slovníček pojmů

Použitá a doporučená literatura:
Obecně:
BRUSCA, R. C., BRUSCA, G. J. Invertebrates. Second Edition. Sunderland, Massachusetts: Sinauer Associates, Inc. Publishers, 2003. Xix + 936 s..
GAISLER, J., ZIMA, J.. Zoologie obratlovců. Praha: Academia 2007, 692 s.
MACHÁČEK, T. a kol.. Proměny vyšší systematiky eukaryot a její odraz ve středoškolské biologii. Živa. 2016, roč. 64, s. 27–30.
VOLF P., HORÁK P. a kolektiv 2007. Paraziti a jejich biologie. Triton. 318 s.
ZRZAVÝ, J. Fylogeneze živočišné říše. Scientia, 2006. 255 s.
ZRZAVÝ, J. Fylogeneze živočichů: ohlédnutí roku 2015. Živa. 2015: roč. 63, s. 201–203.

Cycliophora:
FUNCH, P., KRISTENSEN, R. M. Cycliophora is a new phylum with affinities to Entoprocta and Ectoprocta. Nature. 1995, vol. 378, s. 711–714.
KRISTENSEN, R. M. An introduction to Loricifera, Cycliophora and Micrognathozoa. Integrative and Comparative Biology. 2002, vol. 42, s. 641–651.
LAUMER, C. E., BEKKOUCHE, N., KERBL, A. et al. Spiralian phylogeny informs the evolution of microscopic lineages. Current Biology Report. 2015, vol. 25, s. 2000–2006.

Micrognathozoa, Gnathostomulida:
KRISTENSEN, R. M. An introduction to Loricifera, Cycliophora and Micrognathozoa. Integrative and Comparative Biology. 2002, vol. 42, s. 641–651.
KRISTENSEN, R. M., FUNCH, P. Micrognathozoa: A new class with complicated jaws like those of Rotifera and Gnathostomulida. Journal of Morphology. 2000, vol. 246, s. 1–49.
LAUMER, C. E., BEKKOUCHE, N., KERBL, A. et al. Spiralian phylogeny informs the evolution of microscopic lineages. Current Biology. 2015, vol. 25, s. 2000–2006.
VOSOLSOBĚ, S. Pozice skupiny Micrognathozoa na stromu života. Praha: PřF UK, 2008. 7 s.
ZRZAVÝ, J. Micrognathozoa – zase jeden nový kmen. Vesmír. 2001, vol. 80, s. 437.

Acanthocephala:
SIELAFF, M., SCHMIDT, H., STRUCK, T. H. et al. Phylogeny of Syndermata (syn. Rotifera): Mitochondrial gene order verifies epizoic Seisonidea as sister to endoparasitic Acanthocephala within monophyletic Hemirotifera. Molecular Phylogenetics and Evolution. 2016, vol. 96, s. 79–92.
ZRZAVÝ, J. The interrelationships of metazoan parasites: a review of phylum-and higher-level hypotheses from recent morphological and molecular phylogenetic analyses. Folia Parasitologica. 2001, vol. 48, s. 81–103.

Pentastomida:
ABELE, L. G., KIM, W., FELGENHAUER, B. E. Molecular evidence for inclusion of the phylum Pentastomida in the Crustacea. Molecular Biology and Evolution. 1989, vol. 6, s. 685–691.
MOLLER, O. S., OLESEN, J., AVENANT-OLDEWAGE, A. a kol. 2008. First maxillae suction discs in Branchiura (Crustacea): Development and evolution in light of the first molecular phylogeny of Branchiura, Pentastomida and other “Maxillopoda”. Arthropod Structure & Development 37: 333–346.

Siphonaptera/Mecoptera:
BEUTEL, R. G. A kol. 2011. Morphological and molecular evidence converge upon a robust phylogeny of the megadiverse Holometabola. Cladistics 27: 341–355.
MISOF, B. a kol. Phylogenomics resolves the timing and pattern of insect evolution. Science. 2014, vol. 346, s. 763–767.
PETERS, R. S., MEUSEMANN, K., PETERSEN, M. a kol. The evolutionary history of holometabolous insects inferred from transcriptome-based phylogeny and comprehensive morphological data. BMC Evolutionary Biology. 2014, vol. 14, iss. 52, s. 1–16.
TRAUTWEIN, M. D., WIEGMANN, B. M., BEUTEL, R. a kol. Advances in insect phylogeny at the dawn of the postgenomic era. Annual Review of Entomology. 2012, vol. 57, s. 449–468.

Anoplura/Phthiraptera:
ISHIWATA, K., SASAKI, G., OGAWA, J. a kol. Phylogenetic relationships among insect orders based on three nuclear protein-coding gene sequences. Molecular Phylogenetics and Evolution. 2011, vol. 58, s. 169–180.
LI, H., SHAO, R., SONG, N. a kol. Higher-level phylogeny of paraneopteran insects inferred from mitochondrial genome sequences. Scientific Reports. 2015, vol. 5, s. 8527.
YOSHIZAWA, K., JOHNSON, K. P. Phylogenetic position of Phthiraptera (Insecta: Paraneoptera) and elevated rate of evolution in mitochondrial 12S and 16S rDNA. Molecular Phylogenetics and Evolution. 2003, vol. 29, s. 102–114.
YOSHIZAWA, K., JOHNSON, K. P. How stable is the “polyphyly of lice” hypothesis (Insecta: Psocodea)?: A comparison of phylogenetic signal in multiple genes. Molecular Phylogenetics and Evolution. 2010, vol. 55, s. 939–951.

Strepsiptera:
NIEHUIS, O. a kol. Genomic and morphological evidence converge to resolve the enigma of Strepsiptera. Current Biology. 2012, vol. 22, s. 1–5.
POHL, H., BEUTEL, R. G. The Strepsiptera-odyssey: the history of the systematic placement of an enigmatic parasitic insect order. Entomologia. 2013, vol 1: e4, s. 17–26.
WHITING, M. F., WHEEKER, W. C. Insect homeotic transformation. Nature. 1994, vol. 368, s. 696.

Myxozoa:
CHANG, E. S., NEUHOF, M., RUBINSTEIN, N. D. et al. Genomic insights into the evolutionary origin of Myxozoa within Cnidaria. PNAS. 2015, vol. 112, s. 14912-14917.
FENG, J.-M., XIONG, J., ZHANG, J.-Y. et al. New phylogenomic and comparative analyses provide corroborating evidence that Myxozoa is Cnidaria. Molecular Phylogenetics and Evolution. 2014, vol. 81, s. 10-18.

Ctenophora:
BOROWIEC, M. L., LEE, E. K., CHIU, J. C. et al. Extracting phylogentic signal and accounting for bias in whole-genome data sets supports the Ctenophora as sister to remaining Metazoa. BMC Genomics. 2015, vol. 16, s. 987.
MOROZ, L. L., HALANYCH, K. M. Methodological misconceptions. Nature. 2016, vol. 529, s. 286-287.
MOROZ, L. L., KOCOT, K. M., CITARELLA, M. R. et al. The ctenophore genome and the evolutionary origins of neural systems. Nature. 2014, vol. 510, s. 109-114.
WHELAN, N. V., KOCOT, K. M., MOROZ, L. L. et al. Error, signal, and the placement of Ctenophora sister to all other animals. PNAS. 2015, vol. 112, s. 5773-5778.
WHELAN, N. V., KOCOT, K. M., HALANYCH, K. M. Employing phylogenomics to resolve the relationships among cnidarians, ctenophores, spones, placozoans, and bilaterians. Integrative and Comparative Biology. 2015, vol. 55, s. 0184-1095.

Porifera:
MAH, J. L., CHRISTENSEN-DALSGAARD, K. K., LEYS, S. P. Choanoflagellate and choanocyte collar-flagellar systems and the assumption of homology. Evolution & Development. 2014, vol. 16, s. 25-37.

Xenacoelomorpha:
CANNON, J. T., VELLUTINI, B. C., SMITH J., III et al. Xenacoelomorpha is the sister group to Nephrozoa. Nature. Vol. 530: 7588: 89
GEE, H. Phylogeny A home for Xenoturbella. Nature. 2016. Vol. 530: 7588: 43
ROUSE, G. W., WILSON, N. G., CARVAJAL, J. I. et al. New deep-sea species of Xenoturbella and the position of Xenacoelomorpha. Nature. 2016. Vol. 530: 7588: 94

Bilateria:
SCHEEL, B. M., HAUSDORF, B. Dynamic evolution of mitochondrial ribosomal proteins in Holozoa. Molecular Phylogenetic and Evolution. 2014, vol. 76, s. 67-74.